PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G126000.1.p
Common NamePRUPE_ppa013171mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 137aa    MW: 14912.1 Da    PI: 10.3225
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G126000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.96.7e-193266135
                GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                        C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk++
  Prupe.1G126000.1.p 32 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRR 66
                        ********************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011412.1632662IPR000679Zinc finger, GATA-type
SuperFamilySSF577167.13E-132666No hitNo description
SMARTSM004011.1E-112684IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.1E-153066IPR013088Zinc finger, NHR/GATA-type
CDDcd002023.37E-133185No hitNo description
PfamPF003207.5E-173266IPR000679Zinc finger, GATA-type
PROSITE patternPS0034403257IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MLDPSDKGSE SEEMNIKTPD VGSSEEGHKK TCADCGTSKT PLWRGGPAGP KSLCNACGIR  60
SRKKRRAILG LNKENPNDKK GKRNKQLGDG LKQRLLALGR EVLMQRSTVE RQRRKLGEEE  120
QAAVLLMALS YGSVYA*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00335DAPTransfer from AT3G06740Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007223794.12e-95hypothetical protein PRUPE_ppa013171mg
RefseqXP_008223290.12e-95PREDICTED: GATA transcription factor 15-like
SwissprotQ8LG104e-56GAT15_ARATH; GATA transcription factor 15
TrEMBLM5XTT22e-95M5XTT2_PRUPE; Uncharacterized protein
STRINGVIT_05s0077g01450.t018e-67(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15693298
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.12e-57GATA transcription factor 15